Final sequence index released!

2013-04-22 00:00:00 +0100

The final sequence index file is released on the FTP site

http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/sequence_indices/20130502.sequence.index

The corresponding analysis.sequence.index that contains only >70bp long Illumina reads is

http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/sequence_indices/20130502.analysis.sequence.index

You may find different stats files for this release in http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/sequence_indices. We have achieved our goal of 2500 samples for both low coverage and exome projects! The overlap between >5Gb exome samples and >10Gb low coverage samples is also greater than 2500.